Historical biome distribution and recent human disturbance shape the diversity of arbuscular mycorrhizal fungi.
Identifieur interne : 000D31 ( Main/Exploration ); précédent : 000D30; suivant : 000D32Historical biome distribution and recent human disturbance shape the diversity of arbuscular mycorrhizal fungi.
Auteurs : Meelis P Rtel [Estonie] ; Maarja Öpik [Estonie] ; Mari Moora [Estonie] ; Leho Tedersoo [Estonie] ; Robert Szava-Kovats [Estonie] ; S Ren Rosendahl [Danemark] ; Matthias C. Rillig [Allemagne] ; Ylva Lekberg [États-Unis] ; Holger Kreft [Allemagne] ; Thorunn Helgason [Royaume-Uni] ; Ove Eriksson [Suède] ; John Davison [Estonie] ; Francesco De Bello [République tchèque] ; Tancredi Caruso [Royaume-Uni] ; Martin Zobel [Estonie]Source :
- The New phytologist [ 1469-8137 ] ; 2017.
Descripteurs français
- KwdFr :
- MESH :
- physiologie : Mycorhizes.
- Activités humaines, Biodiversité, Géographie, Humains, Écosystème.
English descriptors
- KwdEn :
- MESH :
- physiology : Mycorrhizae.
- Biodiversity, Ecosystem, Geography, Human Activities, Humans.
Abstract
The availability of global microbial diversity data, collected using standardized metabarcoding techniques, makes microorganisms promising models for investigating the role of regional and local factors in driving biodiversity. Here we modelled the global diversity of symbiotic arbuscular mycorrhizal (AM) fungi using currently available data on AM fungal molecular diversity (small subunit (SSU) ribosomal RNA (rRNA) gene sequences) in field samples. To differentiate between regional and local effects, we estimated species pools (sets of potentially suitable taxa) for each site, which are expected to reflect regional processes. We then calculated community completeness, an index showing the fraction of the species pool present, which is expected to reflect local processes. We found significant spatial variation, globally in species pool size, as well as in local and dark diversity (absent members of the species pool). Species pool size was larger close to areas containing tropical grasslands during the last glacial maximum, which are possible centres of diversification. Community completeness was greater in regions of high wilderness (remoteness from human disturbance). Local diversity was correlated with wilderness and current connectivity to mountain grasslands. Applying the species pool concept to symbiotic fungi facilitated a better understanding of how biodiversity can be jointly shaped by large-scale historical processes and recent human disturbance.
DOI: 10.1111/nph.14695
PubMed: 28722181
Affiliations:
- Allemagne, Danemark, Estonie, Royaume-Uni, République tchèque, Suède, États-Unis
- Basse-Saxe, Berlin, Hovedstaden, Irlande du Nord, Svealand
- Berlin, Copenhague, Göttingen, Stockholm
- Université de Stockholm
Links toward previous steps (curation, corpus...)
Le document en format XML
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Ecology & Evolution, University of Copenhagen, Universitetsparken 15, Building 3, DK-2100, Copenhagen, Denmark.</nlm:affiliation><country xml:lang="fr">Danemark</country><wicri:regionArea>Department of Biology, Sect. Ecology & Evolution, University of Copenhagen, Universitetsparken 15, Building 3, DK-2100, Copenhagen</wicri:regionArea><placeName><settlement type="city">Copenhague</settlement><region type="région" nuts="2">Hovedstaden</region></placeName></affiliation></author><author><name sortKey="Rillig, Matthias C" sort="Rillig, Matthias C" uniqKey="Rillig M" first="Matthias C" last="Rillig">Matthias C. Rillig</name><affiliation wicri:level="3"><nlm:affiliation>Freie Universität Berlin, Institute of Biology, Altensteinstr. 6, D-14195, Berlin, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Freie Universität Berlin, Institute of Biology, Altensteinstr. 6, D-14195, Berlin</wicri:regionArea><placeName><region type="land" nuts="3">Berlin</region><settlement type="city">Berlin</settlement></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin</wicri:regionArea><placeName><region type="land" nuts="3">Berlin</region><settlement type="city">Berlin</settlement></placeName></affiliation></author><author><name sortKey="Lekberg, Ylva" sort="Lekberg, Ylva" uniqKey="Lekberg Y" first="Ylva" last="Lekberg">Ylva Lekberg</name><affiliation wicri:level="1"><nlm:affiliation>MPG Ranch, 1001 S. Higgins Ave, Missoula, MT, 59801, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>MPG Ranch, 1001 S. Higgins Ave, Missoula, MT, 59801</wicri:regionArea><wicri:noRegion>59801</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Ecosystem and Conservation Sciences, University of Montana, Missoula, MT, 59812, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Ecosystem and Conservation Sciences, University of Montana, Missoula, MT, 59812</wicri:regionArea><wicri:noRegion>59812</wicri:noRegion></affiliation></author><author><name sortKey="Kreft, Holger" sort="Kreft, Holger" uniqKey="Kreft H" first="Holger" last="Kreft">Holger Kreft</name><affiliation wicri:level="3"><nlm:affiliation>Department of Biodiversity, Macroecology and Biogeography, Georg-August-University Göttingen, Büsgenweg 1, 37077, Göttingen, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Biodiversity, Macroecology and Biogeography, Georg-August-University Göttingen, Büsgenweg 1, 37077, Göttingen</wicri:regionArea><placeName><region type="land" nuts="2">Basse-Saxe</region><settlement type="city">Göttingen</settlement></placeName></affiliation></author><author><name sortKey="Helgason, Thorunn" sort="Helgason, Thorunn" uniqKey="Helgason T" first="Thorunn" last="Helgason">Thorunn Helgason</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biology, University of York, Heslington, York, YO10 5DD, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Department of Biology, University of York, Heslington, York, YO10 5DD</wicri:regionArea><wicri:noRegion>YO10 5DD</wicri:noRegion></affiliation></author><author><name sortKey="Eriksson, Ove" sort="Eriksson, Ove" uniqKey="Eriksson O" first="Ove" last="Eriksson">Ove Eriksson</name><affiliation wicri:level="4"><nlm:affiliation>Department of Ecology, Environment and Plant Sciences, Stockholm University, 10691, Stockholm, Sweden.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Ecology, Environment and Plant Sciences, Stockholm University, 10691, Stockholm</wicri:regionArea><placeName><settlement type="city">Stockholm</settlement><region nuts="2">Svealand</region></placeName><orgName type="university">Université de Stockholm</orgName></affiliation></author><author><name sortKey="Davison, John" sort="Davison, John" uniqKey="Davison J" first="John" last="Davison">John Davison</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005</wicri:regionArea><wicri:noRegion>51005</wicri:noRegion></affiliation></author><author><name sortKey="De Bello, Francesco" sort="De Bello, Francesco" uniqKey="De Bello F" first="Francesco" last="De Bello">Francesco De Bello</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Faculty of Sciences, University of South Bohemia, Na Zlate Stoce 1, CZ-370 05, České Budějovice, Czech Republic.</nlm:affiliation><country xml:lang="fr">République tchèque</country><wicri:regionArea>Department of Botany, Faculty of Sciences, University of South Bohemia, Na Zlate Stoce 1, CZ-370 05, České Budějovice</wicri:regionArea><wicri:noRegion>České Budějovice</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Institute of Botany, Czech Academy of Sciences, Dukelská 135, CZ-379 82, Třeboň, Czech Republic.</nlm:affiliation><country xml:lang="fr">République tchèque</country><wicri:regionArea>Institute of Botany, Czech Academy of Sciences, Dukelská 135, CZ-379 82, Třeboň</wicri:regionArea><wicri:noRegion>Třeboň</wicri:noRegion></affiliation></author><author><name sortKey="Caruso, Tancredi" sort="Caruso, Tancredi" uniqKey="Caruso T" first="Tancredi" last="Caruso">Tancredi Caruso</name><affiliation wicri:level="2"><nlm:affiliation>School of Biological Sciences, Queen's University of Belfast, 97 Lisburn Road, Belfast, BT9 7BL, Northern Ireland.</nlm:affiliation><country>Royaume-Uni</country><placeName><region type="country">Irlande du Nord</region></placeName><wicri:cityArea>School of Biological Sciences, Queen's University of Belfast, 97 Lisburn Road, Belfast, BT9 7BL</wicri:cityArea></affiliation></author><author><name sortKey="Zobel, Martin" sort="Zobel, Martin" uniqKey="Zobel M" first="Martin" last="Zobel">Martin Zobel</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005</wicri:regionArea><wicri:noRegion>51005</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017</date><idno type="RBID">pubmed:28722181</idno><idno type="pmid">28722181</idno><idno type="doi">10.1111/nph.14695</idno><idno type="wicri:Area/Main/Corpus">000C03</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000C03</idno><idno type="wicri:Area/Main/Curation">000C03</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000C03</idno><idno type="wicri:Area/Main/Exploration">000C03</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Historical biome distribution and recent human disturbance shape the diversity of arbuscular mycorrhizal fungi.</title><author><name sortKey="P Rtel, Meelis" sort="P Rtel, Meelis" uniqKey="P Rtel M" first="Meelis" last="P Rtel">Meelis P Rtel</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005</wicri:regionArea><wicri:noRegion>51005</wicri:noRegion></affiliation></author><author><name sortKey="Opik, Maarja" sort="Opik, Maarja" uniqKey="Opik M" first="Maarja" last="Öpik">Maarja Öpik</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005</wicri:regionArea><wicri:noRegion>51005</wicri:noRegion></affiliation></author><author><name sortKey="Moora, Mari" sort="Moora, Mari" uniqKey="Moora M" first="Mari" last="Moora">Mari Moora</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005</wicri:regionArea><wicri:noRegion>51005</wicri:noRegion></affiliation></author><author><name sortKey="Tedersoo, Leho" sort="Tedersoo, Leho" uniqKey="Tedersoo L" first="Leho" last="Tedersoo">Leho Tedersoo</name><affiliation wicri:level="1"><nlm:affiliation>Natural History Museum, University of Tartu, Vanemuise 46, Tartu, 51014, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Natural History Museum, University of Tartu, Vanemuise 46, Tartu, 51014</wicri:regionArea><wicri:noRegion>51014</wicri:noRegion></affiliation></author><author><name sortKey="Szava Kovats, Robert" sort="Szava Kovats, Robert" uniqKey="Szava Kovats R" first="Robert" last="Szava-Kovats">Robert Szava-Kovats</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005</wicri:regionArea><wicri:noRegion>51005</wicri:noRegion></affiliation></author><author><name sortKey="Rosendahl, S Ren" sort="Rosendahl, S Ren" uniqKey="Rosendahl S" first="S Ren" last="Rosendahl">S Ren Rosendahl</name><affiliation wicri:level="3"><nlm:affiliation>Department of Biology, Sect. Ecology & Evolution, University of Copenhagen, Universitetsparken 15, Building 3, DK-2100, Copenhagen, Denmark.</nlm:affiliation><country xml:lang="fr">Danemark</country><wicri:regionArea>Department of Biology, Sect. Ecology & Evolution, University of Copenhagen, Universitetsparken 15, Building 3, DK-2100, Copenhagen</wicri:regionArea><placeName><settlement type="city">Copenhague</settlement><region type="région" nuts="2">Hovedstaden</region></placeName></affiliation></author><author><name sortKey="Rillig, Matthias C" sort="Rillig, Matthias C" uniqKey="Rillig M" first="Matthias C" last="Rillig">Matthias C. Rillig</name><affiliation wicri:level="3"><nlm:affiliation>Freie Universität Berlin, Institute of Biology, Altensteinstr. 6, D-14195, Berlin, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Freie Universität Berlin, Institute of Biology, Altensteinstr. 6, D-14195, Berlin</wicri:regionArea><placeName><region type="land" nuts="3">Berlin</region><settlement type="city">Berlin</settlement></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin</wicri:regionArea><placeName><region type="land" nuts="3">Berlin</region><settlement type="city">Berlin</settlement></placeName></affiliation></author><author><name sortKey="Lekberg, Ylva" sort="Lekberg, Ylva" uniqKey="Lekberg Y" first="Ylva" last="Lekberg">Ylva Lekberg</name><affiliation wicri:level="1"><nlm:affiliation>MPG Ranch, 1001 S. Higgins Ave, Missoula, MT, 59801, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>MPG Ranch, 1001 S. Higgins Ave, Missoula, MT, 59801</wicri:regionArea><wicri:noRegion>59801</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Ecosystem and Conservation Sciences, University of Montana, Missoula, MT, 59812, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Ecosystem and Conservation Sciences, University of Montana, Missoula, MT, 59812</wicri:regionArea><wicri:noRegion>59812</wicri:noRegion></affiliation></author><author><name sortKey="Kreft, Holger" sort="Kreft, Holger" uniqKey="Kreft H" first="Holger" last="Kreft">Holger Kreft</name><affiliation wicri:level="3"><nlm:affiliation>Department of Biodiversity, Macroecology and Biogeography, Georg-August-University Göttingen, Büsgenweg 1, 37077, Göttingen, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Biodiversity, Macroecology and Biogeography, Georg-August-University Göttingen, Büsgenweg 1, 37077, Göttingen</wicri:regionArea><placeName><region type="land" nuts="2">Basse-Saxe</region><settlement type="city">Göttingen</settlement></placeName></affiliation></author><author><name sortKey="Helgason, Thorunn" sort="Helgason, Thorunn" uniqKey="Helgason T" first="Thorunn" last="Helgason">Thorunn Helgason</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biology, University of York, Heslington, York, YO10 5DD, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Department of Biology, University of York, Heslington, York, YO10 5DD</wicri:regionArea><wicri:noRegion>YO10 5DD</wicri:noRegion></affiliation></author><author><name sortKey="Eriksson, Ove" sort="Eriksson, Ove" uniqKey="Eriksson O" first="Ove" last="Eriksson">Ove Eriksson</name><affiliation wicri:level="4"><nlm:affiliation>Department of Ecology, Environment and Plant Sciences, Stockholm University, 10691, Stockholm, Sweden.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Ecology, Environment and Plant Sciences, Stockholm University, 10691, Stockholm</wicri:regionArea><placeName><settlement type="city">Stockholm</settlement><region nuts="2">Svealand</region></placeName><orgName type="university">Université de Stockholm</orgName></affiliation></author><author><name sortKey="Davison, John" sort="Davison, John" uniqKey="Davison J" first="John" last="Davison">John Davison</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005</wicri:regionArea><wicri:noRegion>51005</wicri:noRegion></affiliation></author><author><name sortKey="De Bello, Francesco" sort="De Bello, Francesco" uniqKey="De Bello F" first="Francesco" last="De Bello">Francesco De Bello</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Faculty of Sciences, University of South Bohemia, Na Zlate Stoce 1, CZ-370 05, České Budějovice, Czech Republic.</nlm:affiliation><country xml:lang="fr">République tchèque</country><wicri:regionArea>Department of Botany, Faculty of Sciences, University of South Bohemia, Na Zlate Stoce 1, CZ-370 05, České Budějovice</wicri:regionArea><wicri:noRegion>České Budějovice</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Institute of Botany, Czech Academy of Sciences, Dukelská 135, CZ-379 82, Třeboň, Czech Republic.</nlm:affiliation><country xml:lang="fr">République tchèque</country><wicri:regionArea>Institute of Botany, Czech Academy of Sciences, Dukelská 135, CZ-379 82, Třeboň</wicri:regionArea><wicri:noRegion>Třeboň</wicri:noRegion></affiliation></author><author><name sortKey="Caruso, Tancredi" sort="Caruso, Tancredi" uniqKey="Caruso T" first="Tancredi" last="Caruso">Tancredi Caruso</name><affiliation wicri:level="2"><nlm:affiliation>School of Biological Sciences, Queen's University of Belfast, 97 Lisburn Road, Belfast, BT9 7BL, Northern Ireland.</nlm:affiliation><country>Royaume-Uni</country><placeName><region type="country">Irlande du Nord</region></placeName><wicri:cityArea>School of Biological Sciences, Queen's University of Belfast, 97 Lisburn Road, Belfast, BT9 7BL</wicri:cityArea></affiliation></author><author><name sortKey="Zobel, Martin" sort="Zobel, Martin" uniqKey="Zobel M" first="Martin" last="Zobel">Martin Zobel</name><affiliation wicri:level="1"><nlm:affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</nlm:affiliation><country xml:lang="fr">Estonie</country><wicri:regionArea>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005</wicri:regionArea><wicri:noRegion>51005</wicri:noRegion></affiliation></author></analytic><series><title level="j">The New phytologist</title><idno type="eISSN">1469-8137</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Biodiversity (MeSH)</term><term>Ecosystem (MeSH)</term><term>Geography (MeSH)</term><term>Human Activities (MeSH)</term><term>Humans (MeSH)</term><term>Mycorrhizae (physiology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Activités humaines (MeSH)</term><term>Biodiversité (MeSH)</term><term>Géographie (MeSH)</term><term>Humains (MeSH)</term><term>Mycorhizes (physiologie)</term><term>Écosystème (MeSH)</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Mycorhizes</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Biodiversity</term><term>Ecosystem</term><term>Geography</term><term>Human Activities</term><term>Humans</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Activités humaines</term><term>Biodiversité</term><term>Géographie</term><term>Humains</term><term>Écosystème</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The availability of global microbial diversity data, collected using standardized metabarcoding techniques, makes microorganisms promising models for investigating the role of regional and local factors in driving biodiversity. Here we modelled the global diversity of symbiotic arbuscular mycorrhizal (AM) fungi using currently available data on AM fungal molecular diversity (small subunit (SSU) ribosomal RNA (rRNA) gene sequences) in field samples. To differentiate between regional and local effects, we estimated species pools (sets of potentially suitable taxa) for each site, which are expected to reflect regional processes. We then calculated community completeness, an index showing the fraction of the species pool present, which is expected to reflect local processes. We found significant spatial variation, globally in species pool size, as well as in local and dark diversity (absent members of the species pool). Species pool size was larger close to areas containing tropical grasslands during the last glacial maximum, which are possible centres of diversification. Community completeness was greater in regions of high wilderness (remoteness from human disturbance). Local diversity was correlated with wilderness and current connectivity to mountain grasslands. Applying the species pool concept to symbiotic fungi facilitated a better understanding of how biodiversity can be jointly shaped by large-scale historical processes and recent human disturbance.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28722181</PMID><DateCompleted><Year>2018</Year><Month>05</Month><Day>15</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1469-8137</ISSN><JournalIssue CitedMedium="Internet"><Volume>216</Volume><Issue>1</Issue><PubDate><Year>2017</Year><Month>Oct</Month></PubDate></JournalIssue><Title>The New phytologist</Title><ISOAbbreviation>New Phytol</ISOAbbreviation></Journal><ArticleTitle>Historical biome distribution and recent human disturbance shape the diversity of arbuscular mycorrhizal fungi.</ArticleTitle><Pagination><MedlinePgn>227-238</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/nph.14695</ELocationID><Abstract><AbstractText>The availability of global microbial diversity data, collected using standardized metabarcoding techniques, makes microorganisms promising models for investigating the role of regional and local factors in driving biodiversity. Here we modelled the global diversity of symbiotic arbuscular mycorrhizal (AM) fungi using currently available data on AM fungal molecular diversity (small subunit (SSU) ribosomal RNA (rRNA) gene sequences) in field samples. To differentiate between regional and local effects, we estimated species pools (sets of potentially suitable taxa) for each site, which are expected to reflect regional processes. We then calculated community completeness, an index showing the fraction of the species pool present, which is expected to reflect local processes. We found significant spatial variation, globally in species pool size, as well as in local and dark diversity (absent members of the species pool). Species pool size was larger close to areas containing tropical grasslands during the last glacial maximum, which are possible centres of diversification. Community completeness was greater in regions of high wilderness (remoteness from human disturbance). Local diversity was correlated with wilderness and current connectivity to mountain grasslands. Applying the species pool concept to symbiotic fungi facilitated a better understanding of how biodiversity can be jointly shaped by large-scale historical processes and recent human disturbance.</AbstractText><CopyrightInformation>© 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Pärtel</LastName><ForeName>Meelis</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Öpik</LastName><ForeName>Maarja</ForeName><Initials>M</Initials><Identifier Source="ORCID">http://orcid.org/0000-0001-8025-7460</Identifier><AffiliationInfo><Affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Moora</LastName><ForeName>Mari</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tedersoo</LastName><ForeName>Leho</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Natural History Museum, University of Tartu, Vanemuise 46, Tartu, 51014, Estonia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Szava-Kovats</LastName><ForeName>Robert</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rosendahl</LastName><ForeName>Søren</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Biology, Sect. Ecology & Evolution, University of Copenhagen, Universitetsparken 15, Building 3, DK-2100, Copenhagen, Denmark.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rillig</LastName><ForeName>Matthias C</ForeName><Initials>MC</Initials><AffiliationInfo><Affiliation>Freie Universität Berlin, Institute of Biology, Altensteinstr. 6, D-14195, Berlin, Germany.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lekberg</LastName><ForeName>Ylva</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>MPG Ranch, 1001 S. Higgins Ave, Missoula, MT, 59801, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Ecosystem and Conservation Sciences, University of Montana, Missoula, MT, 59812, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kreft</LastName><ForeName>Holger</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Department of Biodiversity, Macroecology and Biogeography, Georg-August-University Göttingen, Büsgenweg 1, 37077, Göttingen, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Helgason</LastName><ForeName>Thorunn</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Department of Biology, University of York, Heslington, York, YO10 5DD, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Eriksson</LastName><ForeName>Ove</ForeName><Initials>O</Initials><AffiliationInfo><Affiliation>Department of Ecology, Environment and Plant Sciences, Stockholm University, 10691, Stockholm, Sweden.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Davison</LastName><ForeName>John</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>de Bello</LastName><ForeName>Francesco</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>Department of Botany, Faculty of Sciences, University of South Bohemia, Na Zlate Stoce 1, CZ-370 05, České Budějovice, Czech Republic.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Institute of Botany, Czech Academy of Sciences, Dukelská 135, CZ-379 82, Třeboň, Czech Republic.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Caruso</LastName><ForeName>Tancredi</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>School of Biological Sciences, Queen's University of Belfast, 97 Lisburn Road, Belfast, BT9 7BL, Northern Ireland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zobel</LastName><ForeName>Martin</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu, 51005, Estonia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>07</Month><Day>19</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>New Phytol</MedlineTA><NlmUniqueID>9882884</NlmUniqueID><ISSNLinking>0028-646X</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D044822" MajorTopicYN="Y">Biodiversity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017753" MajorTopicYN="N">Ecosystem</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005843" MajorTopicYN="N">Geography</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006802" MajorTopicYN="Y">Human Activities</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Ice Age</Keyword><Keyword MajorTopicYN="N">Quaternary</Keyword><Keyword MajorTopicYN="N">biodiversity</Keyword><Keyword MajorTopicYN="N">dark diversity</Keyword><Keyword MajorTopicYN="N">mycorrhizas</Keyword><Keyword MajorTopicYN="N">species pool</Keyword><Keyword MajorTopicYN="N">tropical grassy biome</Keyword><Keyword MajorTopicYN="N">wilderness</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>01</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>06</Month><Day>06</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>7</Month><Day>20</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2018</Year><Month>5</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>7</Month><Day>20</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28722181</ArticleId><ArticleId IdType="doi">10.1111/nph.14695</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Allemagne</li><li>Danemark</li><li>Estonie</li><li>Royaume-Uni</li><li>République tchèque</li><li>Suède</li><li>États-Unis</li></country><region><li>Basse-Saxe</li><li>Berlin</li><li>Hovedstaden</li><li>Irlande du Nord</li><li>Svealand</li></region><settlement><li>Berlin</li><li>Copenhague</li><li>Göttingen</li><li>Stockholm</li></settlement><orgName><li>Université de Stockholm</li></orgName></list><tree><country name="Estonie"><noRegion><name sortKey="P Rtel, Meelis" sort="P Rtel, Meelis" uniqKey="P Rtel M" first="Meelis" last="P Rtel">Meelis P Rtel</name></noRegion><name sortKey="Davison, John" sort="Davison, John" uniqKey="Davison J" first="John" last="Davison">John Davison</name><name sortKey="Moora, Mari" sort="Moora, Mari" uniqKey="Moora M" first="Mari" last="Moora">Mari Moora</name><name sortKey="Opik, Maarja" sort="Opik, Maarja" uniqKey="Opik M" first="Maarja" last="Öpik">Maarja Öpik</name><name sortKey="Szava Kovats, Robert" sort="Szava Kovats, Robert" uniqKey="Szava Kovats R" first="Robert" last="Szava-Kovats">Robert Szava-Kovats</name><name 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